Book Chapters
Dowling, Jason, O'Connor, Laura, Acosta, Oscar, Raniga, Parnesh, de Crevoisier, Renaud, Nunes, Jean-Claude, Barateau, Anais, Chourak, Hilda, Choi, Jae Hyuk and Greer, Peter (2022). Image synthesis for MRI-only radiotherapy treatment planning. Biomedical image synthesis and simulation: methods and applications. (pp. 423-445) edited by Ninon Burgos and David Svoboda. London, United Kingdom: Academic Press/Elsevier. doi: 10.1016/B978-0-12-824349-7.00027-X
Acosta, Oscar, Dowling, Jason, Drean, Gael, Simon, Antoine, De Crevoisier, Renaud and Haigron, Pascal (2014). Multi-atlas-based segmentation of pelvic structures from ct scans for planning in prostate cancer radiotherapy. Abdomen and Thoracic Imaging: An Engineering and Clinical Perspective. (pp. 623-656) Boston, MA: Springer US. doi: 10.1007/978-1-4614-8498-1_24
Journal Articles
Chin, V., Finnegan, R.N., Chlap, P., Otton, J., Haidar, A., Holloway, L., Thwaites, D.I., Dowling, J., Delaney, G.P. and Vinod, S.K. (2023). Validation of a Fully Automated Hybrid Deep Learning Cardiac Substructure Segmentation Tool for Contouring and Dose Evaluation in Lung Cancer Radiotherapy. Clinical Oncology. doi: 10.1016/j.clon.2023.03.005
Finnegan, Robert N., Chin, Vicky, Chlap, Phillip, Haidar, Ali, Otton, James, Dowling, Jason, Thwaites, David I., Vinod, Shalini K., Delaney, Geoff P. and Holloway, Lois (2023). Open-source, fully-automated hybrid cardiac substructure segmentation: development and optimisation. Physical and Engineering Sciences in Medicine, 46 (1), 1-17. doi: 10.1007/s13246-023-01231-w
White, J., Wadhawan, A., Min, H., Rabi, Y., Schmutz, B., Dowling, J., Tchernegovski, A., Bourgeat, P., Tetsworth, K., Fripp, J., Mitchell, G., Hacking, C., Williamson, F. and Schuetz, M. (2023). DISTAL RADIUS FRACTURE CLASSIFICATION USING DEEP LEARNING ALGORITHMS. Orthopaedic Proceedings, 105-B (SUPP_2), 102-102. doi: 10.1302/1358-992x.2023.2.102
Hyuk Choi, Jae, Asadi, Behzad, Simpson, John, Dowling, Jason A., Chalup, Stephan, Welsh, James and Greer, Peter (2023). Investigation of a water equivalent depth method for dosimetric accuracy evaluation of synthetic CT. Physica Medica, 105 102507, 102507. doi: 10.1016/j.ejmp.2022.11.011
Durrani, Nabeel, Vukovic, Damjan, van der Burgt, Jeroen, Antico, Maria, van Sloun, Ruud J. G., Canty, David, Steffens, Marian, Wang, Andrew, Royse, Alistair, Royse, Colin, Haji, Kavi, Dowling, Jason, Chetty, Girija and Fontanarosa, Davide (2022). Automatic deep learning-based consolidation/collapse classification in lung ultrasound images for COVID-19 induced pneumonia. Scientific Reports, 12 (1) 17581, 1-15. doi: 10.1038/s41598-022-22196-y
Tahri, S., Barateau, A., Cadin, C., Chourak, H., Ribault, S., Nozahic, F., Acosta, O., Dowling, J.A., Greer, P.B., Largent, A., Lafond, C., De Crevoisier, R. and Nunes, J.C. (2022). A high-performance method of deep learning for prostate MR-only radiotherapy planning using an optimized Pix2Pix architecture. Physica Medica, 103, 108-118. doi: 10.1016/j.ejmp.2022.10.003
Chourak, Hilda, Barateau, Anaïs, Tahri, Safaa, Cadin, Capucine, Lafond, Caroline, Nunes, Jean-Claude, Boue-Rafle, Adrien, Perazzi, Mathias, Greer, Peter B., Dowling, Jason, de Crevoisier, Renaud and Acosta, Oscar (2022). Quality assurance for MRI-only radiation therapy: A voxel-wise population-based methodology for image and dose assessment of synthetic CT generation methods. Frontiers in Oncology, 12 968689, 1-17. doi: 10.3389/fonc.2022.968689
Dai, Wei, Woo, Boyeong, Liu, Siyu, Marques, Matthew, Engstrom, Craig, Greer, Peter B., Crozier, Stuart, Dowling, Jason A. and Chandra, Shekhar S. (2022). CAN3D: Fast 3D medical image segmentation via compact context aggregation. Medical Image Analysis, 82 102562, 1-17. doi: 10.1016/j.media.2022.102562
Richardson, Haylea, Kumar, Mahesh, Tieu, Minh Thi, Parker, Joel, Dowling, Jason A., Arm, Jameen, Best, Leah, Greer, Peter B., Clapham, Matthew, Oldmeadow, Christopher, O’Connor, Laura and Wratten, Chris (2022). Assessing the impact of magnetic resonance treatment simulation (MRSIM) on target volume delineation and dose to organs at risk for oropharyngeal radiotherapy. Journal of Medical Radiation Sciences, 69 (1), 66-74. doi: 10.1002/jmrs.552
Gillman, Ashley G., Lunardo, Febrio, Prinable, Joseph, Belous, Gregg, Nicolson, Aaron, Min, Hang, Terhorst, Andrew and Dowling, Jason A. (2022). Automated COVID-19 diagnosis and prognosis with medical imaging and who is publishing: a systematic review. Physical and Engineering Sciences in Medicine, 45 (1), 13-29. doi: 10.1007/s13246-021-01093-0
Finnegan, Robert N., Reynolds, Hayley M., Ebert, Martin A., Sun, Yu, Holloway, Lois, Sykes, Jonathan R., Dowling, Jason, Mitchell, Catherine, Williams, Scott G., Murphy, Declan G. and Haworth, Annette (2022). A statistical, voxelised model of prostate cancer for biologically optimised radiotherapy. Physics and Imaging in Radiation Oncology, 21, 136-145. doi: 10.1016/j.phro.2022.02.011
O'Connor, Laura M., Skehan, Kate, Choi, Jae H., Simpson, John, Martin, Jarad, Warren-Forward, Helen, Dowling, Jason and Greer, Peter (2021). Optimisation and validation of an integrated magnetic resonance imaging-only radiotherapy planning solution. Physics and Imaging in Radiation Oncology, 20, 34-39. doi: 10.1016/j.phro.2021.10.001
Min, Hang, Dowling, Jason, Jameson, Michael G, Cloak, Kirrily, Faustino, Joselle, Sidhom, Mark, Martin, Jarad, Ebert, Martin A, Haworth, Annette, Chlap, Phillip, de Leon, Jeremiah, Berry, Megan, Pryor, David, Greer, Peter, Vinod, Shalini K and Holloway, Lois (2021). Automatic radiotherapy delineation quality assurance on prostate MRI with deep learning in a multicentre clinical trial. Physics in Medicine and Biology, 66 (19) 195008, 195008. doi: 10.1088/1361-6560/ac25d5
Samarasinghe, Gihan, Jameson, Michael, Vinod, Shalini, Field, Matthew, Dowling, Jason, Sowmya, Arcot and Holloway, Lois (2021). Deep learning for segmentation in radiation therapy planning: a review. Journal of Medical Imaging and Radiation Oncology, 65 (5), 578-595. doi: 10.1111/1754-9485.13286
Chlap, Phillip, Min, Hang, Vandenberg, Nym, Dowling, Jason, Holloway, Lois and Haworth, Annette (2021). A review of medical image data augmentation techniques for deep learning applications. Journal of Medical Imaging and Radiation Oncology, 65 (5), 545-563. doi: 10.1111/1754-9485.13261
Finnegan, Robert, Laugaard Lorenzen, Ebbe, Dowling, Jason, Thwaites, David, Delaney, Geoff, Brink, Carsten and Holloway, Lois (2021). Validation of a new open-source method for automatic delineation and dose assessment of the heart and LADCA in breast radiotherapy with simultaneous uncertainty estimation. Physics in Medicine & Biology, 66 (3) 035014, 035014. doi: 10.1088/1361-6560/abcb1d
Finnegan, Robert Neil, Orlandini, Lucia, Liao, Xiongfei, Yin, Jun, Lang, Jinyi, Dowling, Jason and Fontanarosa, Davide (2021). Feasibility of using a novel automatic cardiac segmentation algorithm in the clinical routine of lung cancer patients. PLoS One, 16 (1) e0245364, 1-14. doi: 10.1371/journal.pone.0245364
Buckley, Jarryd G., Smith, Allan “Ben”, Sidhom, Mark, Rai, Robba, Liney, Gary P., Dowling, Jason A., Metcalfe, Peter E., Holloway, Lois C. and Keall, Paul J. (2020). Measurements of human tolerance to horizontal rotation within an MRI scanner: towards gantry‐free radiation therapy. Journal of Medical Imaging and Radiation Oncology, 65 (1), 112-119. doi: 10.1111/1754-9485.13130
Dowling, Jason A. and O’Connor, Laura M. (2020). Deformable image registration in radiation therapy. Journal of Medical Radiation Sciences, 67 (4), 257-259. doi: 10.1002/jmrs.446
Finnegan, Robert, Lorenzen, Ebbe Laugaard, Dowling, Jason, Jensen, Ingelise, Berg, Martin, Thomsen, Mette Skovhus, Delaney, Geoff P., Koh, Eng-Siew, Thwaites, David, Brink, Carsten, Offersen, Birgitte Vrou and Holloway, Lois (2020). Analysis of cardiac substructure dose in a large, multi-centre danish breast cancer cohort (the DBCG HYPO trial): Trends and predictive modelling. Radiotherapy and Oncology, 153, 130-138. doi: 10.1016/j.radonc.2020.09.004
Marcello, Marco, Denham, James W., Kennedy, Angel, Haworth, Annette, Steigler, Allison, Greer, Peter B., Holloway, Lois C., Dowling, Jason A., Jameson, Michael G., Roach, Dale, Joseph, David J., Gulliford, Sarah L., Dearnaley, David P., Sydes, Matthew R., Hall, Emma and Ebert, Martin A. (2020). Reduced dose posterior to prostate correlates with increased PSA progression in voxel-based analysis of 3 randomized phase 3 trials. International Journal of Radiation Oncology*Biology*Physics, 108 (5), 1304-1318. doi: 10.1016/j.ijrobp.2020.07.030
Buckley, J. G., Dowling, J. A., Sidhom, M., Liney, G. P., Rai, R., Metcalfe, P. E., Holloway, L. C. and Keall, P. J. (2020). Pelvic organ motion and dosimetric implications during horizontal patient rotation for prostate radiation therapy. Medical Physics, 48 (1), 397-413. doi: 10.1002/mp.14579
Marcello, Marco, Denham, James W., Kennedy, Angel, Haworth, Annette, Steigler, Allison, Greer, Peter B., Holloway, Lois C., Dowling, Jason A., Jameson, Michael G., Roach, Dale, Joseph, David J., Gulliford, Sarah L., Dearnaley, David P., Sydes, Mathew R., Hall, Emma and Ebert, Martin A. (2020). Relationships between rectal and perirectal doses and rectal bleeding or tenesmus in pooled voxel-based analysis of 3 randomised phase III trials. Radiotherapy and Oncology, 150, 281-292. doi: 10.1016/j.radonc.2020.07.048
Zhang, Shichuan, Yang, Shuang, Xu, Peng, Xu, Yun, Zhou, Guanqun, Ou, Xiaomin, Wu, Runye, Lan, Mei, Fontanarosa, Davide, Dowling, Jason, Wang, Xiaoshen, Lin, Shaojun, Yi, Jun-Lin, Sun, Ying, Hu, Chaosu and Lang, Jinyi (2020). Variations of Clinical Target Volume Delineation for Primary Site of Nasopharyngeal Cancer Among Five Centers in China. Frontiers in Oncology, 10 1572. doi: 10.3389/fonc.2020.01572
Gholizadeh, Neda, Simpson, John, Ramadan, Saadallah, Denham, Jim, Lau, Peter, Siddique, Sabbir, Dowling, Jason, Welsh, James, Chalup, Stephan and Greer, Peter B. (2020). Voxel‐based supervised machine learning of peripheral zone prostate cancer using noncontrast multiparametric MRI. Journal of Applied Clinical Medical Physics, 21 (10), 179-191. doi: 10.1002/acm2.12992
Marcello, Marco, Denham, James W., Kennedy, Angel, Haworth, Annette, Steigler, Allison, Greer, Peter B., Holloway, Lois C., Dowling, Jason A., Jameson, Michael G., Roach, Dale, Joseph, David J., Gulliford, Sarah L., Dearnaley, David P., Sydes, Matthew R., Hall, Emma and Ebert, Martin A. (2020). Increased Dose to Organs in Urinary Tract Associates With Measures of Genitourinary Toxicity in Pooled Voxel-Based Analysis of 3 Randomized Phase III Trials. Frontiers in Oncology, 10. doi: 10.3389/fonc.2020.01174
Finnegan, Robert, Lorenzen, Ebbe, Dowling, Jason, Holloway, Lois, Thwaites, David and Brink, Carsten (2020). Localised delineation uncertainty for iterative atlas selection in automatic cardiac segmentation. Physics in Medicine and Biology, 65 (3) 035011. doi: 10.1088/1361-6560/ab652a
Largent, Axel, Barateau, Anaïs, Nunes, Jean-Claude, Mylona, Eugenia, Castelli, Joël, Lafond, Caroline, Greer, Peter B., Dowling, Jason A., Baxter, John, Saint-Jalmes, Hervé, Acosta, Oscar and de Crevoisier, Renaud (2019). Comparison of deep learning-based and patch-based methods for pseudo-CT generation in MRI-based prostate dose planning. International Journal of Radiation Oncology Biology Physics, 105 (5), 1137-1150. doi: 10.1016/j.ijrobp.2019.08.049
Choi, Jae Hyuk, Lee, Danny, O'Connor, Laura, Chalup, Stephan, Welsh, James S., Dowling, Jason and Greer, Peter B. (2019). Bulk anatomical density based dose calculation for patient-specific quality assurance of MRI-only prostate radiotherapy. Frontiers in Oncology, 9 997. doi: 10.3389/fonc.2019.00997
Dowling, Jason, Rosenfeld, Anatoly, Waldie, James and Feain, Ilana (2019). Opportunities in space life sciences. Australasian Physical and Engineering Sciences in Medicine, 42 (3), 663-664. doi: 10.1007/s13246-019-00769-y
Buckley, J. G., Rai, R., Liney, G. P., Dowling, J. A., Holloway, L. C., Metcalfe, P. E. and Keall, P. J. (2019). Anatomical deformation due to horizontal rotation: Towards gantry-free radiation therapy. Physics in Medicine and Biology, 64 (17) 175014. doi: 10.1088/1361-6560/ab324c
Kennedy, Angel, Dowling, Jason, Greer, Peter B, Holloway, Lois, Jameson, Michael G, Roach, Dale, Ghose, Soumya, Rivest-Hénault, David, Marcello, Marco and Ebert, Martin A (2019). Similarity clustering-based atlas selection for pelvic CT image segmentation. Medical Physics, 46 (5), 2243-2250. doi: 10.1002/mp.13494
Finnegan, Robert, Dowling, Jason, Koh, Eng-Siew, Tang, Simon, Otton, James, Delaney, Geoff, Batumalai, Vikneswary, Luo, Carol, Atluri, Pramukh, Satchithanandha, Athiththa, Thwaites, David and Holloway, Lois (2019). Feasibility of multi-atlas cardiac segmentation from thoracic planning CT in a probabilistic framework. Physics in Medicine and Biology, 64 (8) 085006. doi: 10.1088/1361-6560/ab0ea6
Veera, Jacqueline, Lim, Karen, Dowling, Jason A., O'Connor, Chelsie, Holloway, Lois C. and Vinod, Shalini K. (2019). Dedicated MRI simulation for cervical cancer radiation treatment planning: Assessing the impact on clinical target volume delineation. Journal of Medical Imaging and Radiation Oncology, 63 (2), 236-243. doi: 10.1111/1754-9485.12831
De Leon, Jeremiah, Jameson, Michael G., Rivest-Henault, David, Keats, Sarah, Rai, Robba, Arumugam, Sankar, Wilton, Lee, Ngo, Diana, Liney, Gary, Moses, Daniel, Dowling, Jason, Martin, Jarad and Sidhom, Mark (2019). Reduced motion and improved rectal dosimetry through endorectal immobilization for prostate stereotactic body radiotherapy. British Journal of Radiology, 92 (1098) 20190056. doi: 10.1259/bjr.20190056
Largent, Axel, Barateau, Anaïs, Nunes, Jean-Claude, Lafond, Caroline, Greer, Peter B., Dowling, Jason A., Saint-Jalmes, Hervé, Acosta, Oscar and de Crevoisier, Renaud (2019). Pseudo-CT generation for MRI-only radiation therapy treatment planning: Comparison among patch-based, atlas-based, and bulk density methods. International Journal of Radiation Oncology Biology Physics, 103 (2), 479-490. doi: 10.1016/j.ijrobp.2018.10.002
Roach, Dale, Holloway, Lois C, Jameson, Michael G, Dowling, Jason A, Kennedy, Angel, Greer, Peter B, Krawiec, Michele, Rai, Robba, Denham, Jim, De Leon, Jeremiah, Lim, Karen, Berry, Megan E, White, Rohen T, Bydder, Sean A, Tan, Hendrick T, Croker, Jeremy D, McGrath, Alycea, Matthews, John, Smeenk, Robert J and Ebert, Martin A (2019). Multi-observer contouring of male pelvic anatomy: highly variable agreement across conventional and emerging structures of interest. Journal of Medical Imaging and Radiation Oncology, 63 (2), 264-271. doi: 10.1111/1754-9485.12844
Gholizadeh, Neda, Greer, Peter B., Simpson, John, Denham, Jim, Lau, Peter, Dowling, Jason, Hondermarck, Hubert and Ramadan, Saadallah (2019). Characterization of prostate cancer using diffusion tensor imaging: A new perspective. European Journal of Radiology, 110, 112-120. doi: 10.1016/j.ejrad.2018.11.026
Martin, Jarad, Keall, Paul, Siva, Shankar, Greer, Peter, Christie, David, Moore, Kevin, Dowling, Jason, Pryor, David, Chong, Peter, McLeod, Nicholas, Raman, Avi, Lynam, James, Smart, Joanne, Oldmeadow, Christopher, Tang, Colin I., Murphy, Declan G., Millar, Jeremy, Tai, Keen Hun, Holloway, Lois, Reeves, Penny, Hayden, Amy, Lim, Tee, Holt, Tanya and Sidhom, Mark (2019). TROG 18.01 phase III randomised clinical trial of the Novel Integration of New prostate radiation schedules with adJuvant Androgen deprivation: NINJA study protocol. BMJ Open, 9 (8) e030731. doi: 10.1136/bmjopen-2019-030731
Greer, Peter, Martin, Jarad, Sidhom, Mark, Hunter, Perry, Pichler, Peter, Choi, Jae Hyuk, Best, Leah, Smart, Joanne, Young, Tony, Jameson, Michael, Afinidad, Tess, Wratten, Chris, Denham, James, Holloway, Lois, Sridharan, Swetha, Rai, Robba, Liney, Gary, Raniga, Parnesh and Dowling, Jason (2019). A multi-center prospective study for implementation of an MRI-only prostate treatment planning workflow. Frontiers in Oncology, 9 (AUG) 826. doi: 10.3389/fonc.2019.00826
Arabi, Hossein, Dowling, Jason A., Burgos, Ninon, Han, Xiao, Greer, Peter B., Koutsouvelis, Nikolaos and Zaidi, Habib (2018). Comparative study of algorithms for synthetic CT generation from MRI: Consequences for MRI-guided radiation planning in the pelvic region. Medical Physics, 45 (11), 5218-5233. doi: 10.1002/mp.13187
Kennedy, Angel, Dowling, Jason, Greer, Peter B. and Ebert, Martin A. (2018). Estimation of Hounsfield unit conversion parameters for pelvic CT images. Australasian Physical and Engineering Sciences in Medicine, 41 (3), 739-745. doi: 10.1007/s13246-018-0651-x
Chandra, Shekhar S., Dowling, Jason A., Engstrom, Craig, Xia, Ying, Paproki, Anthony, Neubert, Aleš, Rivest-Hénault, David, Salvado, Olivier, Crozier, Stuart and Fripp, Jurgen (2018). A lightweight rapid application development framework for biomedical image analysis. Computer Methods and Programs in Biomedicine, 164, 193-205. doi: 10.1016/j.cmpb.2018.07.011
Roach, D., Jameson, M. G., Dowling, J. A., Ebert, M. A., Greer, P. B., Kennedy, A. M., Watt, S. and Holloway, L. C. (2018). Correlations between contouring similarity metrics and simulated treatment outcome for prostate radiotherapy. Physics in Medicine and Biology, 63 (3) 035001. doi: 10.1088/1361-6560/aaa50c
Koivula, Lauri, Kapanen, Mika, Seppälä, Tiina, Collan, Juhani, Dowling, Jason A., Greer, Peter B., Gustafsson, Christian, Gunnlaugsson, Adalsteinn, Olsson, Lars E., Wee, Leonard and Korhonen, Juha (2017). Intensity-based dual model method for generation of synthetic CT images from standard T2-weighted MR images – Generalized technique for four different MR scanners. Radiotherapy and Oncology, 125 (3), 411-419. doi: 10.1016/j.radonc.2017.10.011
Gulliford, S. L., Ghose, S., Ebert, M. A., Kennedy, A., Dowling, J., Mitra, J., Joseph, D. J. and Denham, J. W. (2017). Radiotherapy dose-distribution to the perirectal fat space (PRS) is related to gastrointestinal control-related complications. Clinical and Translational Radiation Oncology, 7, 62-70. doi: 10.1016/j.ctro.2017.10.002
Wyatt, Jonathan J., Dowling, Jason A., Kelly, Charles G., McKenna, Jill, Johnstone, Emily, Speight, Richard, Henry, Ann, Greer, Peter B. and McCallum, Hazel M. (2017). Investigating the generalisation of an atlas-based synthetic-CT algorithm to another centre and MR scanner for prostate MR-only radiotherapy. Physics in Medicine and Biology, 62 (24), N548-N560. doi: 10.1088/1361-6560/aa9676
Ghose, Soumya, Greer, Peter B., Sun, Jidi, Pichler, Peter, Rivest-Henault, David, Mitra, Jhimli, Richardson, Haylea, Wratten, Chris, Martin, Jarad, Arm, Jameen, Best, Leah and Dowling, Jason A. (2017). Regression and statistical shape model based substitute CT generation for MRI alone external beam radiation therapy from standard clinical MRI sequences. Physics in Medicine and Biology, 62 (22), 8566-8580. doi: 10.1088/1361-6560/aa9104
Ghose, Soumya, Dowling, Jason A., Rai, Robba and Liney, Gary P. (2017). Substitute CT generation from a single ultra short time echo MRI sequence: Preliminary study. Physics in Medicine and Biology, 62 (8), 2950-2960. doi: 10.1088/1361-6560/aa508a
Whelan, Brendan, Liney, Gary P., Dowling, Jason A., Rai, Robba, Holloway, Lois, McGarvie, Leigh, Feain, Ilana, Barton, Michael, Berry, Megan, Wilkins, Rob and Keall, Paul (2017). An MRI-compatible patient rotation system - Design, construction, and first organ deformation results. Medical Physics, 44 (2), 581-588. doi: 10.1002/mp.12065
Ghose, Soumya, Denham, James W., Ebert, Martin A., Kennedy, Angel, Mitra, Jhimli and Dowling, Jason A. (2016). Multi-atlas and unsupervised learning approach to perirectal space segmentation in CT images. Physical and Engineering Sciences in Medicine, 39 (4), 933-941. doi: 10.1007/s13246-016-0496-0
Chandra, Shekhar S., Dowling, Jason A., Greer, Peter B., Martin, Jarad, Wratten, Chris, Pichler, Peter, Fripp, Jurgen and Crozier, Stuart (2016). Fast automated segmentation of multiple objects via spatially weighted shape learning. Physics in Medicine and Biology, 61 (22), 8070-8084. doi: 10.1088/0031-9155/61/22/8070
Walker, Amy, Metcalfe, Peter, Liney, Gary, Batumalai, Vikneswary, Dundas, Kylie, Glide-Hurst, Carri, Delaney, Geoff P., Boxer, Miriam, Yap, Mei Ling, Dowling, Jason, Rivest-Henault, David, Pogson, Elise and Holloway, Lois (2016). MRI geometric distortion: Impact on tangential whole-breast IMRT. Journal of Applied Clinical Medical Physics, 17 (5), 7-19. doi: 10.1120/jacmp.v17i5.6242
Ghose, Soumya, Mitra, Jhimli, Rivest-Hénault, David, Fazlollahi, Amir, Stanwell, Peter, Pichler, Peter, Sun, Jidi, Fripp, Jurgen, Greer, Peter B. and Dowling, Jason A. (2016). MRI-alone radiation therapy planning for prostate cancer: Automatic fiducial marker detection. Medical Physics, 43 (5), 2218-2228. doi: 10.1118/1.4944871
Dowling, Jason A., Sun, Jidi, Pichler, Peter, Rivest-Hénault, David, Ghose, Soumya, Richardson, Haylea, Wratten, Chris, Martin, Jarad, Arm, Jameen, Best, Leah, Chandra, Shekhar S., Fripp, Jurgen, Menk, Frederick W. and Greer, Peter B. (2015). Automatic substitute computed tomography generation and contouring for magnetic resonance imaging (MRI)-alone external beam radiation therapy from standard MRI sequences. International Journal of Radiation Oncology Biology Physics, 93 (5), 1144-1153. doi: 10.1016/j.ijrobp.2015.08.045
Ghose, Soumya, Holloway, Lois, Lim, Karen, Chan, Philip, Veera, Jacqueline, Vinod, Shalini K., Liney, Gary, Greer, Peter B. and Dowling, Jason (2015). A review of segmentation and deformable registration methods applied to adaptive cervical cancer radiation therapy treatment planning. Artificial Intelligence in Medicine, 64 (2), 75-87. doi: 10.1016/j.artmed.2015.04.006
Walker, Amy, Liney, Gary, Holloway, Lois, Dowling, Jason, Rivest-Henault, David and Metcalfe, Peter (2015). Continuous table acquisition MRI for radiotherapy treatment planning: Distortion assessment with a new extended 3D volumetric phantom. Medical Physics, 42 (4), 1982-1991. doi: 10.1118/1.4915920
Sun, Jidi, Dowling, Jason A., Pichler, Peter, Parker, Joel, Martin, Jarad, Stanwell, Peter, Arm, Jameen, Menk, Fred and Greer, Peter B. (2015). Investigation on the performance of dedicated radiotherapy positioning devices for MR scanning for prostate planning. Journal of Applied Clinical Medical Physics, 16 (2), 4-13. doi: 10.1120/jacmp.v16i2.4848
Sun, J., Pichler, P., Dowling, J., Menk, F., Stanwell, P., Arm, J. and Greer, P. B. (2014). MR simulation for prostate radiation therapy: Effect of coil mounting position on image quality. British Journal of Radiology, 87 (1042) 20140325. doi: 10.1259/bjr.20140325
Dowling, Jason A., Lambert, Jonathan, Parker, Joel, Salvado, Olivier, Fripp, Jurgen, Capp, Anne, Wratten, Chris, Denham, James W. and Greer, Peter B. (2012). An atlas-based electron density mapping method for magnetic resonance imaging (MRI)-alone treatment planning and adaptive MRI-based prostate radiation therapy. International Journal of Radiation: Oncology - Biology - Physics, 83 (1), E5-E11. doi: 10.1016/j.ijrobp.2011.11.056
Lambert, Jonathan, Greer, Peter B., Menk, Fred, Patterson, Jackie, Parker, Joel, Dahl, Kara, Gupta, Sanjiv, Capp, Anne, Wratten, Chris, Tang, Colin, Kumar, Mahesh, Dowling, Jason, Hauville, Sarah, Hughes, Cynthia, Fisher, Kristen, Lau, Peter, Denham, James W. and Salvado, Olivier (2011). MRI-guided prostate radiation therapy planning: Investigation of dosimetric accuracy of MRI-based dose planning. Radiotherapy and Oncology, 98 (3), 330-334. doi: 10.1016/j.radonc.2011.01.012
Conference Papers
Lebrat, Leo, Nicolson, Aaron, Santa Cruz, Rodrigo, Belous, Gregg, Koopman, Bevan and Dowling, Jason (2022). CSIRO at ImageCLEFmedical Caption 2022. CEUR-WS.
Dowling, J., Boles, W. and Maeder, A. (2022). Mobility assessment using simulated Arti.cial Human Vision. IEEE. doi: 10.1109/cvpr.2005.494
Chourak, Hilda, Barateau, Anais, Mylona, Eugenia, Cadin, Capucine, Lafond, Caroline, Greer, Peter, Dowling, Jason, Jean-Claude-Nunes, , Crevoisier, Renaud de and Acosta, Oscar (2021). Voxel-Wise Analysis for Spatial Characterisation of Pseudo-CT Errors in MRI-Only Radiotherapy Planning. IEEE. doi: 10.1109/isbi48211.2021.9433800
Nicolson, Aaron, Dowling, Jason and Koopman, Bevan (2021). AEHRC CSIRO at ImageCLEFmed caption 2021. CEUR-WS.
Tonina, Tommaso, Alshehhi, Hamda, Dowling, Jason, Jamanca-Lino, Gustavo, Kennedy, Erin, Kucher, Yelyzaveta, Rijin, K. V. and Norber, Itai (2021). Advanced Propulsion as a Cornerstone for Space Exploration and Interstellar Living. International Astronautical Federation, IAF.
Largent, Axel, Nunes, Jean-Claude, Saint-Jalmes, Herve, Baxter, John, Greer, Peter, Dowling, Jason, Crevoisier, Renaud De and Acosta, Oscar (2019). Pseudo-CT generation for mri-only radiotherapy: comparative study between a generative adversarial network, a u-net network, a patch-based, and an atlas based methods. 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), Venice, Italy, 8-11 April 2019. New York, NY USA: IEEE Computer Society. doi: 10.1109/ISBI.2019.8759278
Arabi, Hossein, Dowling, Jason A., Burgos, Ninon, Han, Xiao, Greer, Peter B., Koutsouvelis, Nikolaos and Zaidi, Habib (2018). Comparison of synthetic CT generation algorithms for MRI-only radiation planning in the pelvic region. 2018 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), Sydney, NSW Australia, 10-17 November 2018. Piscataway, NJ United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/NSSMIC.2018.8824321
Roach, D., Ebert, M.A., Jameson, M., Dowling, J.A., Kennedy, A., Greer, P. and Holloway, L. (2018). Inter-observer contouring variation of multiple pelvic structures on CT and MR for prostate cancer. ESTRO 37 - European Society for Radiotherapy & Oncology, Barcelona, Spain, 21-23 April 2018. Shannon, Ireland: Elsevier. doi: 10.1016/s0167-8140(18)31923-6
Largent, Axel, Nunes, Jean-Claude, Saint-Jalmes, Hervé, Simon, Antoine, Perichon, Nicolas, Barateau, Anais, Hervé, Chloé, Lafond, Caroline, Greer, Peter B., Dowling, Jason A., De Crevoisier, Renaud and Acosta, Oscar (2017). Pseudo-CT generation by conditional inference random forest for MRI-based radiotherapy treatment planning. European Signal Processing Conference (EUSIPCO), Kos, Greece, 28 August - 2 September 2017. Piscataway, NJ, United States: Institute of Electrical and Electronics Engineers. doi: 10.23919/EUSIPCO.2017.8081166
Koivula, L., Wee, L., Dowling, J., Greer, P., Seppälä, T. and Korhonen, J. (2017). Intensity based synthetic CT generation from standard T2-weighted MR images with three MR scanners. ESTRO 36 - European Society for Radiotherapy & Oncology, Vienna, Austria, 5-9 May 2017. Shannon, Ireland: Elsevier. doi: 10.1016/s0167-8140(17)30884-8
Bell, L. R., Dowling, J. A., Pogson, E. M., Metcalfe, P. and Holloway, L. (2017). Atlas-based segmentation technique incorporating inter-observer delineation uncertainty for whole breast. Micro-Mini & Nano-Dosimetry & Innovative Technologies in Radiation Therapy (MMND&ITRO2016), Hobart, TAS Australia, 26–28 January 2016. Bristol, United Kingdom: Institute of Physics. doi: 10.1088/1742-6596/777/1/012002
Dowling, J. A., Burdett, N., Greer, P. B., Sun, J., Parker, J., Pichler, P., Stanwell, P., Chandra, S., Rivest-Henault, D., Ghose, S., Salvado, O. and Fripp, J. (2014). Automatic atlas based electron density and structure contouring for MRI-based prostate radiation therapy on the cloud. XVII International Conference on the Use of Computers in Radiation Therapy, Melbourne, Australia, 6–9 May 2013. Bristol, United Kingdom: Institute of Physics Publishing. doi: 10.1088/1742-6596/489/1/012048
Whelan, B., Kumar, S., Dowling, J., Lambert, J., Lim, K., Salvado, O., Begg, J., Greer, P., Vinod, S. and Holloway, L. (2012). Requirements for the accuracy of electron density data planning for MRI based cervix cancer treatment planning. 54th Annual Meeting and Exhibition of the American Association of Physicists in Medicine (AAPM), Charlotte, NC, United States, 29July-02 August 2012. College Park, MD, United States: American Association of Physicists in Medicine. doi: 10.1118/1.4735020
Dowling, Jason A., Planitz, Birgit M., Maeder, Anthony J., Du, Jiang Du, Pham, Binh, Boyd, Colin, Chen, Shaokang, Bradley, Andrew P. and Crozier, Stuart (2007). Visual quality assessment of watermarked medical images. Medical Imaging 2007: Image Perception, Observer Performance, and Technology Assessment, San Diego, USA, 21-22 February 2007. Bellingham, Wash., U.S.A.: SPIE - International Society for Optical Engineering. doi: 10.1117/12.707571
Dowling, Jason, Boles, Wageeh and Maeder, Anthony (2006). Simulated artificial human vision: The effects of spatial resolution and frame rate on mobility. 4th International Conference on Active Media Technology, Brisbane Australia, Jun 07-09, 2006. AMSTERDAM: IOS PRESS.